dynast
latest
Introduction:
Getting started
Contents:
Pipeline Usage
Technical Information
API
References
Tutorials:
NASC-seq
scSLAM-seq
scNT-seq
sci-fate
dynast
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Dynast: Complete splicing and labeling quantification from metabolic labeling scRNA-seq
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Dynast: Complete splicing and labeling quantification from metabolic labeling scRNA-seq
Introduction:
Getting started
Installation
Command-line structure
Basic usage
Contents:
Pipeline Usage
Building the STAR index with
ref
Aligning FASTQs with
align
Calling consensus sequences with
consensus
Quantifying counts with
count
Estimating counts with
estimate
Control samples
Technical Information
Consensus procedure
Count procedure
Estimate procedure
Read groups
Statistical estimation
API
Subpackages
Submodules
Package Contents
References
Tutorials:
NASC-seq
scSLAM-seq
scNT-seq
sci-fate
Indices and tables
Index
Module Index
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